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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828570.1_cds_XP_016503443.1_16989
CDS Infomation

[gene=LOC107821527] [db_xref=GeneID:107821527] [protein=alanine aminotransferase 2-like] [protein_id=XP_016503443.1] [location=join(11865..12086,12751..12801,12986..13036,13272..13337,13415..13476,14818..14896,14985..15089,15191..15301,15555..15692,15899..15973,16170..16290,16422..16576,16661..16735,16975..17178,17387..17503)] [gbkey=CDS]
Sequence

ATGCGGAGATTCGTAACCCACAGAGCTAGAAATCTCATCACCAGTACTGTAACCAGAACT
AGAACTACTACTTCTATTTGTTCTTCTTCTCCTCCTCTTACTTCCCCATTACCTGCTGCG
TTTCGTTTCTTGTCCACTCTTCAGCCTTCTTCTCCTTCTCCTGATTCAATGGCTTCCGAT
TATTCATCCACACCTGTCACTCTAGACACCCTTAACCCCAAGGTTTTGAACTGTGAGTAT
GCTGTCCGTGGAGAGATTGTCACACTTGCTCAGAAATTGCAGCAAGAAATCAAGGAGAAT
CCAGGTTCTCATCCCTTTGATGAGATCTTATACTGCAATATTGGAAATCCTCAATCACTG
GCTCAGCAGCCTATCACTTTCTTTAGAGAGGTCCTTGCATTGTGCGACCATCCAGCCATT
TTAGACAAAAGTGAAACACAAGGTCTGTTCAGTGCGGATGCCATAGAACGAGCTTTCCAG
ATCCTTGACCAAATTCCTGGGAGAGCAACTGGTGCATACAGCCACAGTCAGGGTATCAAA
GGATTACGCGATACAATCGCTTCTGGTATTGAAGCTCGTGATGGCTTCCCTGCGGATCCA
AATGATCTTTTCTTGACTGATGGTGCAAGCCCAGCGGTTCACATGATGATGCAGCTGCTC
ATCAGGTCAGAGAATGATGGAATTCTCTGTCCCATTCCCCAGTATCCTCTTTACTCTGCT
TCAATTGCCCTCCATGGTGGAACTCTTGTTCCTTATTATCTTGATGAACAAACAGGATGG
GGGCTTGAGATCTCAGAACTTGAGCAACAGCTGAAAACTGCAAAATCCAAGGGTATTGAT
GTTAGGGCTTTGGTTGTGATCAATCCAGGCAACCCTACTGGGCAGGTTCTTGGTGAGGCC
AATCAACGGGAAATTGTAGAGTTCTGCAAGAGGGAAGGCCTTGTCCTTCTGGCTGATGAA
GTCTATCAAGAAAATGTTTACGTGCCTGACAAGAAATTCCACTCATTTAAAAAAATTTCC
CGCTCTATGGGATATGGTGAAAAGGATATATCTTTAGTGTCTTTCCAGTCCGTGTCAAAA
GGATTCTATGGAGAGTGTGGAAAGCGAGGAGGTTACATGGAGGTCACTGGTTTTAGCCCT
GAAGTGAGGGAACAGATATACAAACTGTCGTCTGTCAATCTGTGTTCCAATATCTCTGGT
CAGATACTTGCAAGCCTCGTCATGAGTCCCCCAAAGGTGGGAGATGAATCATATGAGTCT
TTTTCTGCTGAGAAAGAAGGAATACTCTCTTCCTTGGCAAGACGTGCAAAGACACTAGAA
GATGCATTAAATAGTTTGGAAGGAGTGACATGCAATAGAGCAGAAGGGGCTATGTATCTC
TTTCCACGTATTAACTTGCCCGATAAAGCAATAAAAGCAGCAGAAGCAGCTAAAACTGCA
CCAGATGCCTTTTATGCTCGACGCCTCCTTAATGCCACTGGAATCGTTGTTGTTCCAGGC
TCTGGATTTCGTCAGGTTCCTGGAACCTGGCATTTTAGGTGCACAATATTACCACAAGAA
GAGAAGATACCAGCTATTGTATCCCGTCTTACCGAATTCCATGAGAAGTTCATGAATGAA
TTTCGCGGCTAA

Peptide Sequence

PEP ID

XP_016503443.1
PEP Infomation

PREDICTED: alanine aminotransferase 2-like [Nicotiana tabacum]
Sequence

MRRFVTHRARNLITSTVTRTRTTTSICSSSPPLTSPLPAAFRFLSTLQPSSPSPDSMASD
YSSTPVTLDTLNPKVLNCEYAVRGEIVTLAQKLQQEIKENPGSHPFDEILYCNIGNPQSL
AQQPITFFREVLALCDHPAILDKSETQGLFSADAIERAFQILDQIPGRATGAYSHSQGIK
GLRDTIASGIEARDGFPADPNDLFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA
SIALHGGTLVPYYLDEQTGWGLEISELEQQLKTAKSKGIDVRALVVINPGNPTGQVLGEA
NQREIVEFCKREGLVLLADEVYQENVYVPDKKFHSFKKISRSMGYGEKDISLVSFQSVSK
GFYGECGKRGGYMEVTGFSPEVREQIYKLSSVNLCSNISGQILASLVMSPPKVGDESYES
FSAEKEGILSSLARRAKTLEDALNSLEGVTCNRAEGAMYLFPRINLPDKAIKAAEAAKTA
PDAFYARRLLNATGIVVVPGSGFRQVPGTWHFRCTILPQEEKIPAIVSRLTEFHEKFMNE
FRG

Transcript Sequence

Gene sequence data has not been registered.